References:

  1. Global Infectious Diseases and Epidemiology Online Network: Infectious Diseases of the Philippines, 2013 eBook Edition, ISBN 978-1-61755-582-4, by Stephen Berger. Accessed here.

AgentVirus - RNA. Coronaviridae, Coronavirus
ReservoirHuman
Bat
Civet
Cat
VectorNone
VehicleDroplet
Fecal-oral (questionable)
Incubation Period3 to 5 days (As early or late as 2 to 23 days)
Diagnostic TestsIdentification of virus through PCR and direct immunofluorescence
Serology (ELISA)
Typical Adult TherapySupportive. Isolation (respiratory and other secretions).
Typical Pediatric TherapyAs for adult
Clinical HintsExposure to endemic area or patient; fever (>38 C), cough, respiratory difficulty, headache, myalgia, diarrhea, hepatic dysfunction, CPK elevation, thrombocytopenia. Case-fatality rate 10.9%
SynonymsHuman coronavirus Erasmus Medical Centre, London1 novel CoV 2012, Novel CoV 2012, SARG,
Severe Acute Respiratory Syndrome, Sindroma Respiratoria Aguda, Sindrome respiratorio agudo
grave, SRA, SRAS, Syndrome Respiratoire Aigu Severe.

Clinical Case Definition for SARS

A person with a history of:

  • Fever (≥38°C)
  • AND One or more symptoms of lower respiratory tract illness (cough, difficulty breathing, shortness of breath)
  • AND Radiographic evidence of lung infiltrates consistent with pneumonia or RDS; OR autopsy findings consistent with the pathology of pneumonia or RDS without an identifiable cause.
  • AND No alternative diagnosis can fully explain the illness.

The Laboratory case definition of SARS is as follows: A person with symptoms and signs that are clinically suggestive of SARS AND with positive laboratory findings for SARS-CoV based on one or more of the following diagnostic criteria:

  1. PCR positive for SARS-CoV. PCR positive using a validated method from:
    • At least two different clinical specimens (e.g. nasopharyngeal and stool)
    • OR The same clinical specimen collected on two or more occasions during the course of the illness (e.g. sequential nasopharyngeal aspirates)
    • OR Two different assays or repeat PCR using a new RNA extract from the original clinical sample on each occasion of testing.
  2. Seroconversion by ELISA or IFA
    • Negative antibody test on acute serum followed by positive antibody test on convalescent phase serum tested in parallel
    • OR Fourfold or greater rise in antibody titer between acute and convalescent phase sera tested in parallel.
  3. Virus isolation
    • Isolation in cell culture of SARS-CoV from any specimen AND PCR confirmation using a validated method.

Acute Infection

The incubation period is generally 3 to 5 days, with a range of 2 to 10 days.

  • Most patients complain of headache, sore throat, myalgia and chills.
  • Additional findings reported in some patients include rhinorrhea, chest pain, diarrhea, abdominal pain, vomiting and confusion.
  • Initial reports described isolated instances of “rash.”
  • Lymphocytopenia, neutrophilia or neutropenia, thrombocytopenia, and elevations of CPK and hepatic transaminase levels are common.
  • Rhabdomyolysis and renal failure were reported in some patients.

After 3 to 7 days, lower respiratory symptoms occur, particularly a dry, nonproductive cough which may be accompanied by hypoxemia.

  • Features of ‘atypical pneumonia’ develop on the fourth to fifth days of illness.
  • Ten to twenty percent of patients described to date have developed signs of adult respiratory distress syndrome.
  • Chest roentgenograms reveal generalized interstitial or patchy infiltrates, with areas of consolidation in a few cases.
  • Sub-clinical and non-pneumonic infections are reported.

Complications

The overall case-fatality rate is 10.9%; but as high as 50% among those who develop severe respiratory illness.

  • Multi-organ dysfunction (bowel, liver, kidney) may occur in severe cases. 23
  • Risk factors for mortality include age >60 years, history of contact with SARS patients within 2 weeks prior to illness onset, health occupation, inferior hospital ranking and longer interval to seeking medical care (longer than 1 day).
  • Advanced age, leucocytosis, detectable virus in nasopharyngeal aspirates (PCR) and elevated serum lactic dehydrogenase (LDH) levels have been associated with a poor prognosis.
  • The disease appears to be milder among young children.
  • Some studies have suggested that concurrent infection by human metapneumoviruses or orthoreoviruses are associated with more severe illness and poor prognosis.
  • Nearly 60% of survivors experienced psychiatric disorders (mainly PTSD or depression)